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gen-version.sh was only ever run by this one recipe, so tools/ now
holds just the scripts a person runs.
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A checkout without tags made `git describe` fail and the empty result
overwrote the fallback, so CI release binaries carried no version at
all. The release workflow now also fetches tags so a tag build stamps
its exact version.
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The C sources move to source/, the served files to assets/, the bundled
Git submodule to libraries/git and the filter scripts to extensions/.
Everything the build generates now lands in build/, so a clean is a
single remove and the tree stays clean.
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